CDS

Accession Number TCMCG006C77226
gbkey CDS
Protein Id XP_013697369.1
Location complement(join(50530194..50530392,50530533..50530598,50530680..50530761,50530850..50530945,50531026..50531131,50531218..50531277,50531486..50531606,50531988..50532099,50532247..50532346,50532444..50532498,50532679..50532785,50532874..50532926,50533004..50533129,50533433..50533501,50533621..50533777,50533868..50534108,50534352..50534511,50534602..50534842,50534928..50535058,50535175..50535297,50535414..50535469,50535589..50535746,50535835..50535966,50536049..50536102))
Gene LOC106401403
GeneID 106401403
Organism Brassica napus

Protein

Length 934aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013841915.2
Definition exosome complex exonuclease RRP44 homolog A-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the RNR ribonuclease family
KEGG_TC -
KEGG_Module M00391        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12585        [VIEW IN KEGG]
ko:K18681        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000175        [VIEW IN EMBL-EBI]
GO:0000176        [VIEW IN EMBL-EBI]
GO:0000178        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0004532        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005085        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008408        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016075        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016796        [VIEW IN EMBL-EBI]
GO:0016896        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0034661        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071034        [VIEW IN EMBL-EBI]
GO:0071043        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090503        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905354        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTGCAGAGCAAGGTTTTCAATAAGAAGACCAGAGGAGGTCGTATTCAAAAGCAAGTGAGAGAAGTGTATCTACGAGATGACATATACTGTGGAGCCTTTTCCTGCAAGTCTTGCGATACTTCAGCTGCTCGTTTGTCTTCCCCTAAGATTATTGTTGTCGATACCAACGTCGTTCTTCACCAAATTGATTTGTTGGAGAATCAGGCAATAGACAATGTTGTTGTTCTCTCTGTGGTGCTGGATGAGGTTAAGAACAGGAACAAATCTGTTTACAACAGAATCAGAAGTCTCTGCAGCAATCCAGCCAAGCAATTCTATGTTTTCTCCAATCATGTCCACAAGGATACTTATGTGCAGGCCATGGAGAGAGAGACTGCCAATGACCACAATGATAGAGCTATTCGTGTCGCTACATTATGGTACCAGAAGCATCTAGGGGATACATCTCAGGTGTTGCTTGTCACTAATGACAGAGAGAATAAACTGAAAGCCATTGAAGAGGGAATATCTGCAGAGACAATTGAGGCTTATGTAAAATCAATTGGGCAACCTGAATTGTTGGACCTGCTTGCCCAACCAGCCGGTGAAGACGTCACTATGGAAGATGCAGATGATTCCAGACCTTCCAAGAGGAAACTTGTATACCTAGAGCATAAACCCATGTCTGAGATTACTGCTGGTTTGCACCGTGGAATATACCATCAAGGGAAACTCCGTGTCAATCGTTTCAATCCTTTTGAAGCTTATGTTGGAAGCGAGAGCATTGGAGAAGAGATTATTATCTATGGGCGCAGCAATATGAACAGGGCTTTCGATGGTGATATTGTCGCGGTAGAACTCTTGCCTCGTGATCAGTGGCAAGAGGAGAAGGCGTTATCTATAGCTGAAGAAGATGAGGAGGAAGATGACGATACTGTTCATTTGGCTCCCAACAGTGCTGATGATGCTCCTAGAACCTCAAATTTAGCCCAAGTAACTTCTGGTGATAAAAATGCTAACCCTGCTCGTCCTTCAGGTCGTGTAGTTGGTGTTATCCGTAGAAATTGGCACTCATATTGTGGATCTCTTGAACCAATGTCCCTGCCTGCTGGAAGTGGTGGAACGGCGCATGCTTTATTCGTCTCTAAAGATCGAAGAATCCCCAAGATTCGCATTAACACTCGTCAGCTTGAGAACCTTTTGGATATGAGGATAGTAGTGGCAGTTGATTCTTGGGACCGTCAATCTCGGTATCCTTCTGGCCATTATGTACGACCAATTGGCAAAATAGGTGACAGGGAAACTGAAACAGAGGTTGTCTTGATAGAGAACGATGTTGACTACTCGCCATTCTCTTCTCAAGTTCTGGCATGCTTGCCACCCTTACCTTGGTCTGTATCTGCTGAAGACGTCTCTAGTCCTGTTAGGCAAGACTTGCGACATTTGCTTGTATTTAGTGTGGACCCTCCGGGTTGCAAGGATATTGATGATGCATTGCACTGTACATCGCTTCCAAACGGGAACTTTGAACTTGGAGTCCACATTGCGGATGTAACAAACTTTGTACACCCTGGTACTCCTTTGGATGATGAGGCATCAAAAAGAGGCACATCTGTCTACCTTGTTGACCGCCGTATTGACATGCTTCCCAAGCCTTTAACTGAAGATATTTGCTCGCTTAGAGCTGATGTGGAAAGACTTGCATTCTCGGTTATTTGGGAAATGAGCCCTGGAGCTGAAATTATCTCAACGAGATTTACAAAGAGCATAATCAAGTCTTCTGCAGCATTGTCCTATGTTGAAGCTCAGGCTCGGATGGATGACAGCCGATTGACGGACCCCGTGACTACTGATCTGAGGAACATGAATGCTTTAGCAAAGATAATGAGGCAAAGACGTATCGATAGGGGAGCCTTAACTCTTGCGTCTGCAGAAGTTAAATTTCAGATTGATACTGAGACTCATGATCCTCTTGACATTGGTATGTATCAGATTCGGGAAGCAAACCAAATGGTTGAGGAATTCATGCTTGCTGCAAATGTTTCAGTCGCTGAACAAATTCTTAAACTATTCCCTTCGTGTTCACTATTAAGGCGTCATCCTACTCCAACAAGAGAAATGCTTGAACCGCTGCTGCGTACTGCTGCAGCTATTGGGCTTAGCTTAGATGTCTCTTCATCTAAAGCTTTGGCTGATTCACTGGACCGAGCTGTGGGTGAGGATCCATATTTCAATAAGCTGATCAGGATATTGGCTACTAGGTGCATGACACAGGCTGTGTACTTCTGTAGTGGGGATCTCAGTCCTCCAGAATATCTTCATTATGGACTTGCAGCACCTTTATATACTCATTTTACATCTCCTATTCGAAGATATGCTGATGTCTTTGTGCACAGATTACTTGCCGCGTCATTAGGAATATACAAGCTTCCAACGGTGTTCCAAGACAGACCTCAACTTACTAGCGTTGCTGATAATTTGAACTATCGGCATAGGAATGCCCAGATGGCAAGTCGAGCTTCAGTAGAGCTGCACACCCTCATATACTTCAAAAACCGACCCACAGATGCAGAGGCAAGAGTTGTGAAGATAAGATCCAATGGTTTTATAGTATTCGTCCCAAAGTATGGAATCGAAGGCCCTGTTTACTTAACAGCAAAAGGTGAGAAAGGACTTGGTGACTGGTACGTAGATGAGGAGAAGCAGAAGATCGTTAAGATGGATGGAAGTTTATCTTACAGTGTCTTGCAAACTGTGAGGATTCACATGGAGGTAGTGGAGCCTCAGCCTAACCGACCCAAACTTGAACTCACCCTCTTGTAA
Protein:  
MLQSKVFNKKTRGGRIQKQVREVYLRDDIYCGAFSCKSCDTSAARLSSPKIIVVDTNVVLHQIDLLENQAIDNVVVLSVVLDEVKNRNKSVYNRIRSLCSNPAKQFYVFSNHVHKDTYVQAMERETANDHNDRAIRVATLWYQKHLGDTSQVLLVTNDRENKLKAIEEGISAETIEAYVKSIGQPELLDLLAQPAGEDVTMEDADDSRPSKRKLVYLEHKPMSEITAGLHRGIYHQGKLRVNRFNPFEAYVGSESIGEEIIIYGRSNMNRAFDGDIVAVELLPRDQWQEEKALSIAEEDEEEDDDTVHLAPNSADDAPRTSNLAQVTSGDKNANPARPSGRVVGVIRRNWHSYCGSLEPMSLPAGSGGTAHALFVSKDRRIPKIRINTRQLENLLDMRIVVAVDSWDRQSRYPSGHYVRPIGKIGDRETETEVVLIENDVDYSPFSSQVLACLPPLPWSVSAEDVSSPVRQDLRHLLVFSVDPPGCKDIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVDRRIDMLPKPLTEDICSLRADVERLAFSVIWEMSPGAEIISTRFTKSIIKSSAALSYVEAQARMDDSRLTDPVTTDLRNMNALAKIMRQRRIDRGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAEQILKLFPSCSLLRRHPTPTREMLEPLLRTAAAIGLSLDVSSSKALADSLDRAVGEDPYFNKLIRILATRCMTQAVYFCSGDLSPPEYLHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYKLPTVFQDRPQLTSVADNLNYRHRNAQMASRASVELHTLIYFKNRPTDAEARVVKIRSNGFIVFVPKYGIEGPVYLTAKGEKGLGDWYVDEEKQKIVKMDGSLSYSVLQTVRIHMEVVEPQPNRPKLELTLL